世界中医药
文章摘要
引用本文:赵晶晶1,郑福增2,周子朋2,张安琪1,郭嘉1.基于网络药理学和分子对接探讨桃红四物汤治疗类风湿关节炎的作用机制[J].世界中医药,2021,(12):.  
基于网络药理学和分子对接探讨桃红四物汤治疗类风湿关节炎的作用机制
Study on the Mechanism of Taohong Siwu Decoction in the Treatment of Rheumatoid Arthritis Based on Network Pharmacology and Molecular Docking
投稿时间:2020-11-06  
DOI:10.3969/j.issn.1673-7202.2021.12.001
中文关键词:  类风湿关节炎  桃红四物汤  网络药理学  分子对接
English Keywords:Rheumatoid arthritis  Taohong Siwu Decoction  Network Pharmacology  Molecular Docking
基金项目:国家自然科学基金青年基金项目(81804050);2018年度河南省中医药科学研究重点课题(2018ZY1011)
作者单位
赵晶晶1,郑福增2,周子朋2,张安琪1,郭嘉1 1 河南中医药大学郑州450000 2 河南省中医院郑州450000 
摘要点击次数: 941
全文下载次数: 0
中文摘要:
      目的:运用网络药理学和分子对接技术探讨桃红四物汤治疗类风湿关节炎的作用机制,为临床应用提供理论依据。方法:运用中药系统药理学数据库与分析平台(TCMSP)检索桃红四物汤的有效成分及作用靶点,通过GeneCards、OMIM、TTD、PharmGkb、DrugBank数据库收集疾病相关靶点。运用Cytoscape 3.6.1软件构建“化合物-靶点”网络,借助STRING平台构建交集靶点蛋白质-蛋白质相互作用(PPI)网络,并使用Cytoscape对网络进行拓扑分析,获取核心基因,通过R语言进行基因本体(GO)富集分析和京都基因和基因组百科全书(KEGG)通路富集分析,最后将核心基因与主要活性成分进行分子对接验证。结果:TCMSP检索得到桃红四物汤治疗RA的有效成分41个,对应靶点154个;拓扑分析得到AKT1、JUN、TP53、MMP9、MAPK14等10个核心基因。GO富集分析共涉及生物过程(BP)2 316个,细胞组分(CC)75个,分子功能(MF)205个,KEGG通路富集分析筛选得到158条与RA相关通路,主要涉及P13K-AKT、白细胞介素17、肿瘤坏死因子等信号通路,集中调控炎症、血管翳形成、细胞增殖与凋亡等。分子对接结果表明,主要活性化合物能够分别与核心靶点结合,并展现出较好的亲和力。结论:本研究对桃红四物汤治疗RA的多成分、多靶点、多通路的作用与机制进行初步探讨,可为后续基础研究提供参考,为临床应用提供理论依据。
English Summary:
      To explore the possible mechanism of action of Taohong Siwu Decoction in the treatment of rheumatoid arthritis by using network pharmacology and molecular docking technology, so as to provide theoretical basis for clinical application.Methods:TCMSP was used to retrieve the effective components and targets of Taohong Siwu Decoction, and disease-related targets were collected from GeneCards, OMIM, TTD, PharmGkb and DrugBank databases.Cytoscape 3.6.1 track software was used to build “compound-targets” network.With the help of the STRING intersection target protein interaction network, and Cytoscape was used for network topology analysis, and the core genes was obtained.By R language, GO enrichment and KEGG pathway enrichment analysis were conducted.Finally, molecular docking verification of core genes and main active ingredients performed molecular docking verification.Results:It was predicted that there were 41 active components and 154 corresponding targets in the treatment of RA by Taohong Siwu Decoction.Topological analysis revealed AKT1, JUN, TP53, MMP9, MAPK14 and other 10 core genes.GO enrichment analysis involved biological process(BP) 2 316, 75 cell components(CC), molecular function(MF) 205, KEGG pathway enrichment analysis filter to get 158 RA related pathways, mainly involving P13K-AKT, interleukin 17, tumor necrosis factor signaling pathways and other pathway, such as centralized control inflammation, pannus formation, cell proliferation and apoptosis, etc.The results of molecular docking showed that the main active compounds can bind to the core targets respectively and exhibit good affinity.Conclusion:In this study, the effect and mechanism of Taohong Siwu Decoction in the treatment of RA with multiple components, multiple targets and multiple pathways were preliminarily discussed, so as to provide reference for subsequent basic research and theoretical basis for clinical application.
查看全文  查看/发表评论  下载PDF阅读器