基于网络药理学及分子对接研究益气养阴清热方治疗2型糖尿病的作用机制
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国家自然科学基金项目(81860784);广西名老中医民族医传承工作室建设项目(桂卫中[2014]9号)


Mechanism of Yiqi Yangyin Qingre Formula in Treatment of Type 2 Diabetes Mellitus Based on Network Pharmacology and Molecular Docking
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    目的:运用网络药理学及分子对接预测益气养阴清热方治疗2型糖尿病的作用机制。方法:借助中药系统药理学数据库与分析平台(TCMSP)、BATMAN-TCM数据库获取益气养阴清热方6味中药的化学成分和作用靶点。通过GeneCards数据库获取治疗2型糖尿病相关靶点;利用R软件获取有效成分与疾病相关靶点之交集;利用Cytoscape v3.8.0中CytoHubba插件筛选出核心靶点,利用ClueGo插件对核心靶标进行基因本体(GO)富集分析和京都基因和基因组百科全书(KEGG)富集分析。借助AutoDockTool、Vina、Pymol软件,将进行预处理及分子对接。结果:本研究共获取养阴清热方相关有效成分70个,活性成分所涉及的相关靶点222个,有槲皮素、山柰酚、木犀草素、汉黄芩素、芒柄花黄素等;对13个核心靶点进行GO生物过程、KEGG富集分析分别得到36条和47条结果,主要与对脂多糖的反应,对缺氧的反应,对氧化应激的反应相关,涉及IL-17信号通路、糖尿病并发症中的AGE-RAGE信号通路、Toll样受体信号通路、肿瘤坏死因子信号通路等。分子对接结果显示核心成分与核心靶点JUN、AKT1、MAPK1、TP53、IL6、MAPK14、ESR1、CXCL8对接良好。结论:益气养阴清热方可通过多途径、多靶点、多通道影响调节糖脂代谢、改善胰岛素抵抗、抑制肝糖异生、降低炎症反应、保护血管内皮、改善胰岛B细胞分泌功能、调节免疫反应等途径治疗2型糖尿病。

    Abstract:

    To explore the mechanism of Yiqi Yangyin Qingre Formula(YQYYQR) on type 2 diabetes mellitus(T2DM) by network pharmacology and molecular docking.Methods:TCMSP and BATMAN-TCM were used to obtain the chemical constituents and action targets of six Chinese medicinal drugs in YQYYQR.The targets related to the treatment of T2DM were obtained from GeneCards.The common targets were obtained by the R programming language.The core targets were screened out by CytoHubba plug-in in Cytoscape v3.8.0.The core targets were analyzed for Go and KEGG enrichment analyses by the ClueGo plug-in.AutoDockTool,Vina,and Pymol were used for pretreatment and molecular docking.Results:Seventy active constituents of YQYYQR were obtained,and 222 targets were involved in the active constituents,such as quercetin,kaempferol,luteolin,wogonin,and miscanthin.As revealed by GO and KEGG enrichment analyses of 13 core targets,36 entries of biological processes,such as responses to lipopolysaccharide,hypoxia,and oxidative stress,and 47 entries of pathways,such as IL-17 signaling pathway,AGE-RAGE signaling pathway in diabetic complications,Toll-like receptor signaling pathway,and tumor necrosis factor signaling pathway,were obtained.The results of molecular docking showed that the core constituents showed good affinity with the core targets JUN,AKT1,MAPK1,TP53,IL6,MAPK14,ESR1,and CXCL8.Conclusion:YQYYQR can treat T2DM by regulating glucose and lipid metabolism,improving insulin resistance,inhibiting hepatic gluconeogenesis,reducing inflammatory reaction,protecting vascular endothelium,improving islet β-cell secretion,and mediating immune response through multiple channels,multiple targets,and multiple pathways.

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胡洲映,李双蕾,陈远瑾,覃海恋,宋石开,胡飞.基于网络药理学及分子对接研究益气养阴清热方治疗2型糖尿病的作用机制[J].世界中医药,2022,(02).

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  • 收稿日期:2020-12-24
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  • 在线发布日期: 2022-02-14
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